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A curated bibliography of the group's work on non-B DNA prediction, interpretable deep learning for genomics, and the biological consequences of flipon variation — each entry linked to the model, dataset and code version it describes.

All ADAR1 G-quadruplexes Z-DNA benchmarking deep learning flipons immunity transcription

Zα and Zβ Localize ADAR1 to Flipons That Modulate Innate Immunity, Alternative Splicing, and Nonsynonymous RNA Editing

Herbert A, Cherednichenko O, Lybrand TP, Egli M, Poptsova M

Z-DNA flipons ADAR1 immunity

Int J Mol Sci, 2025 doi:10.3390/ijms26062422 Publisher ↗

ADAR1 masks the cancer immunotherapeutic promise of ZBP1-driven necroptosis

Zhang T, Yin C, Fedorov A, Qiao L, Bao H, Beknazarov N, Wang S, Gautam A, Williams RM, Crawford JC, Peri S, Studitsky V, Beg AA, Thomas PG, Walkley C, Xu Y, Poptsova M, Herbert A, Balachandran S

ADAR1 immunity

Nature, 2022 doi:10.1038/s41586-022-04753-7 Publisher ↗