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A curated bibliography of the group's work on non-B DNA prediction, interpretable deep learning for genomics, and the biological consequences of flipon variation — each entry linked to the model, dataset and code version it describes.

All ADAR1 G-quadruplexes Z-DNA benchmarking deep learning flipons immunity transcription

Zα and Zβ Localize ADAR1 to Flipons That Modulate Innate Immunity, Alternative Splicing, and Nonsynonymous RNA Editing

Herbert A, Cherednichenko O, Lybrand TP, Egli M, Poptsova M

Z-DNA flipons ADAR1 immunity

Int J Mol Sci, 2025 doi:10.3390/ijms26062422 Publisher ↗

Conserved microRNAs and Flipons Shape Gene Expression during Development by Altering Promoter Conformations

Herbert A, Pavlov F, Konovalov D, Poptsova M

flipons transcription

Int J Mol Sci, 2023 doi:10.3390/ijms24054884 Publisher ↗

Z-flipon variants reveal the many roles of Z-DNA and Z-RNA in health and disease

Umerenkov D, Herbert A, Konovalov D, Danilova A, Beknazarov N, Kokh V, Fedorov A, Poptsova M

Z-DNA flipons

Life Sci Alliance, 2023 doi:10.26508/lsa.202301962 Publisher ↗

Z-RNA and the Flipside of the SARS Nsp13 Helicase: Is There a Role for Flipons in Coronavirus-Induced Pathology?

Herbert A, Poptsova M

Z-DNA flipons immunity

Front Immunol, 2022 doi:10.3389/fimmu.2022.912717 Publisher ↗